Biosafety improvement of aquaculture-associated bacteriophage preparations via endotoxin reduction: implications for Flavobacterium psychrophilum control

  • Mustafa Ustundag Department of Chemistry and Chemical Management Technologies, Muradiye Vocational School, Van Yuzuncu Yıl University, Van, Türkiye
  • Berrin Ustundag Department of Scientific Research Project Office, Van Yuzuncu Yıl University, Van, Türkiye
Keywords: bacteriophages, cell culture, cytocompatibility, endotoxin

Abstract

The use of bacteriophages specific to Flavobacterium psychrophilum in aquaculture has shown promising results in controlling infections and reducing fish mortality. However, the biosafety and cytocompatibility of these phage preparations, especially under long-term exposure conditions, remain largely unexplored. In this study, bacteriophages specific to F. psychrophilum were isolated and characterized. To enhance biosafety, the phages were subjected to endotoxin reduction procedures. Endotoxin levels and phage titers were quantitatively determined before and after purification. Cytocompatibility was evaluated using the MTT assay on the mammalian cell line MCF-7 over a 120-hour exposure period. The purification process reduced endotoxin levels by 97.3%, while phage titers were preserved or increased, indicating that biological activity was maintained. Time-dependent analyses revealed that crude phage preparations caused a decrease in cell viability, with statistically significant reductions observed at 72, 96, and 120 hours (p < 0.05). In contrast, no difference in cell viability was observed in cells treated with purified phage preparations compared to the control group (p > 0.05). These findings demonstrate that the cytotoxic profile of phage preparations is determined by endotoxin content and prolonged exposure duration. This study highlights that endotoxin removal is critically important for ensuring cytocompatibility and demonstrates that endotoxin content in phage preparations used in aquaculture may lead to reduced cell viability in mammalian cells under long-term exposure conditions.

References

Abedon S (2011) Phage therapy pharmacology: calculating phage dosing. Advances in Applied Microbiology 77: 1–40.

Ahmed F, Soliman FM, Adly MA, Soliman HAM, El-Matbouli M, Saleh M (2020) In vitro assessment of the antimicrobial efficacy of chitosan nanoparticles against major fish pathogens and their cytotoxicity to fish cell lines. Journal of Fish Diseases 43(9): 1049–1063.

Alharbi N, Alshaikh SK (2022) Isolation and characterization of lytic phage against Salmonella typhimurium. Biosciences Biotechnology Research Asia 19(4): 927.

Altınok I, Türe M, Ustaoğlu D, Cebeci A, Öztürk RÇ (2026b) Genomic characterisation and in vivo therapeutic evaluation of the novel phage Lp ACM616_1 targeting Lactococcus petauri. Journal of Fish Diseases: e70124.

Altınok I, Türe M, Ustaoğlu D, Cebeci A, Öztürk RÇ, … Kaygusuz Ö (2026a) Isolation and characterization of novel Yersinia ruckeri bacteriophages for potential use in aquaculture. Aquaculture 612: 743219.

Anand T, Bera BCh, Vaid RK, Barua S, Riyesh T, … Tripathi BN (2016) Abundance of antibiotic resistance genes in environmental bacteriophages. Journal of General Virology 97(12): 3458–3466.

Avila BW, Huyvaert KP, Winkelman DL, Fetherman ER (2022) Factors affecting post-challenge survival of Flavobacterium psychrophilum in susceptible rainbow trout from the literature. Pathogens 11(11): 1318.

Bhat RAH, Altınok İ (2023) Antimicrobial resistance (AMR) and alternative strategies for combating AMR in aquaculture. Turkish Journal of Fisheries and Aquatic Sciences 23(11).

Bichet MC, Adderley J, Avellaneda-Franco L, Magnin-Bougma I, Torriero-Smith N, … Barr JJ (2023) Mammalian cells internalize bacteriophages and use them as a resource to enhance cellular growth and survival. PLoS Biology 21(10): e3002341.

Bichet MC, Chin WH, Richards W, Lin YW, Avellaneda-Franco L, … Barr JJ (2021) Bacteriophage uptake by mammalian cell layers represents a potential sink that may impact phage therapy. iScience 24(4): 102287.

Bonilla N, Rojas MI, Netto Flores Cruz G, Hung SH, Rohwer F, Barr JJ (2016) Removal of endotoxins from bacteriophage preparations by extraction with organic solvents. PLoS ONE 11(4): e0152672.

Chen F, Wang D, Lu T, Li S (2023) Identification of a novel type II-C Cas9 from the fish pathogen Flavobacterium psychrophilum. Frontiers in Microbiology 14.

Cornuault JK, Petit M, Mariadassou M, Benevides L, Moncaut E, … Paepe MD (2018) Phages infecting Faecalibacterium prausnitzii belong to novel viral genera that help to decipher intestinal viromes. Microbiome 6(1): 65.

Demir V, Bucher J, Kropf C, Arenz M, Segner H (2020) Comparative study of cytotoxicity by platinum nanoparticles and ions in vitro systems based on fish cell lines. Toxicology in Vitro 66: 104859.

Duarte J, Pereira C, Calado R, Almeida A (2025) Phage stability research: a systematic review bridging methodological gaps and paving the way for industrial and clinical applications. PHAGE 6(3): 189–200.

Dufour N, Delattre R, Ricard JD, Debarbieux L (2017) The lysis of pathogenic Escherichia coli by bacteriophages releases less endotoxin than by β-lactams. Clinical Infectious Diseases 64(11): 1582–1588.

Dufour N, Delattre R, Ricard JD, Debarbieux L (2019) The lysis of pathogenic Escherichia coli by bacteriophages releases less endotoxin than by β-lactams. Clinical Infectious Diseases 68(9): 1582–1588.

Eker ED, Çetin B, Şahin NÖ (2019) In vitro cytotoxic effects and quality control studies on black cumin seed capsules and oils in Turkey market. Journal of Medical Case Reports and Reviews 2(7).

Elgendy MY, Ali SE, Dayem AA, Khalil RH, Moustafa MM, Abdelsalam M (2024) Alternative therapies recently applied in controlling farmed fish diseases: mechanisms, challenges, and prospects. Aquaculture International 32: 9017–9078.

Fent K (2001) Fish cell lines as versatile tools in ecotoxicology: assessment of cytotoxicity, cytochrome P4501A induction potential and estrogenic activity of chemicals and environmental samples. Toxicology in Vitro 15(4–5): 477–488.

Goswami M, Yadav K, Dubey A, Sharma BS, Konwar R, … Lakra WS (2014) In vitro cytotoxicity assessment of two heavy metal salts in a fish cell line (RF). Drug and Chemical Toxicology 37(1): 48–54.

Henein A, Hanlon GW, Cooper CJ, Denyer SP (2016) A partially purified Acinetobacter baumannii phage preparation exhibits no cytotoxicity in 3T3 mouse fibroblast cells. Frontiers in Microbiology 7: 1198.

Hernandez-Moreno D, Navas JM, Fernández-Cruz ML (2022) Short- and long-term effects of nanobiomaterials in fish cell lines: Applicability of RTgill-W1. Chemosphere 309(1): 136636.

Huang K, Nitin N (2019) Edible bacteriophage-based antimicrobial coating on fish feed for enhanced treatment of bacterial infections in aquaculture industry. Aquaculture 502: 18–25.

Islam MS, Nime I, Pan F, Wang X (2023) Isolation and characterization of phage ISTP3 for bio-control application against drug-resistant Salmonella. Frontiers in Microbiology 14.

Kalatzis PG, Bastías R, Kokkari C, Katharios P (2016) Isolation and characterization of two lytic bacteriophages, φSt2 and φGrn1; phage therapy application for biological control of Vibrio alginolyticus in aquaculture live feeds. PLoS One 11(3): e0151101.

Ketchum PA, Novitsky TJ (2000) Assay of endotoxin by Limulus amebocyte lysate. In: Septic Shock Methods and Protocols, pp. 3–12. Humana Press.

Kolarova J, Velisek J, Svobodova Z (2021) Comparison of in vitro (fish cell line) and in vivo (fish and crustacean) acute toxicity tests in aquatic toxicology. Veterinarni Medicina 66(8): 350–355.

Kropinski AM, Mazzocco A, Waddell TE, Lingohr E, Johnson RP (2009) Enumeration of bacteriophages by double agar overlay plaque assay. In: Methods in Molecular Biology 501: 69–76.

Lallo GD, Evangelisti M, Mancuso FM, Ferrante P, Marcelletti S, … Thaller MC (2014) Isolation and partial characterization of bacteriophages infecting Pseudomonas syringae pv. actinidiae, causal agent of kiwifruit bacterial canker. Journal of Basic Microbiology 54(11): 1210–1221.

Lehti TA, Pajunen MI, Skog MS, Finne J (2017) Internalization of a polysialic acid-binding Escherichia coli bacteriophage into eukaryotic neuroblastoma cells. Nature Communications 8: 1915.

Magalhães PO, Lopes AM, Mazzola PG, Rangel-Yagui C, Penna TCV, Pessoa A (2020) Methods of endotoxin removal from biological preparations: a review. Journal of Pharmaceutical Sciences 96(6): 1471–1484.

Merabishvili M, Pirnay JP, Verbeken G, Chanishvili N, Tediashvili M, … Vaneechoutte M (2009) Quality-controlled small-scale production of a well-defined bacteriophage cocktail for use in human clinical trials. PLoS ONE 4(3): e4944.

Molina F, Simancas A, Tabla R, Gómez A, Roa I, Rebollo JE (2020) Diversity and local coadaptation of Escherichia coli and coliphages from small ruminants. Frontiers in Microbiology 11: 564522.

Mosmann T (1983) Rapid colorimetric assay for cellular growth and survival: application to proliferation and cytotoxicity assays. Journal of Immunological Methods 65(1–2): 55–63.

Motulsky H (2014) Intuitive biostatistics: a nonmathematical guide to statistical thinking. Oxford University Press, Oxford.

Nithin MS, Girisha SK, Boregowda KK, Ramakrishna NM, Suresh PK, … Abernathy JW (2024) Novel lytic bacteriophage AhFM11 as an effective therapy against hypervirulent Aeromonas hydrophila. Scientific Reports 14(1): 16882.

Pereira C, Duarte J, Costa P, Braz M, Almeida A (2022) Bacteriophages in the control of Aeromonas sp. in aquaculture systems: an integrative view. Antibiotics 11(2): 163.

Petsch D, Anspach FB (2000) Endotoxin removal from protein solutions. Journal of Biotechnology 76(2–3): 97–119.

Pirnay J, Djebara S, Steurs G, Griselain J, Cochez C, … Merabishvili M (2024) Personalized bacteriophage therapy outcomes for 100 consecutive cases: a multicentre, multinational, retrospective observational study. Nature Microbiology 9(6): 1434–1453.

Podlacha M, Grabowski Ł, Kosznik-Kwaśnicka K, Zdrojewska K, Stasiłojć M, … Węgrzyn A (2021) Interactions of bacteriophages with animal and human organisms– safety issues in the light of phage therapy. International Journal of Molecular Sciences 22(16): 8937.

Ramesh N, Royam MM, Manohar P, Leptihn S (2021) Application of bacteriophages and endolysins in aquaculture. Biological Control 160: 104678.

Riss TL, Moravec RA, Niles AL, Benink HA, Worzella TJ, Minor L (2016) Cell viability assays. In: Assay Guidance Manual.

Segner H (2004) Cytotoxicity assays with fish cells as an alternative to the acute lethality test with fish. Alternatives to Laboratory Animals 21(2): 117–124.

Strepparava N, Wahli T, Segner H, Petrini O (2014) Detection and quantification of Flavobacterium psychrophilum in water and fish tissue samples by quantitative real-time PCR. BMC Microbiology 14: 105.

Szermer-Olearnik B, Boratyński J (2015) Removal of endotoxins from bacteriophage preparations by extraction with organic solvents. PLoS ONE 10(3): e0122672.

Tan F, Wang M, Wang W, Lu Y (2007) Comparative evaluation of the cytotoxicity sensitivity of six fish cell lines to four heavy metals in vitro. Toxicology in Vitro 22(1):164–70.

Türe M, Cebeci A, Altınok I, Aygür E, Çalışkan N (2022) Isolation and characterization of Aeromonas hydrophila-specific lytic bacteriophages. Aquaculture 558(4): 738371.

Ustundag M, Ustundag B (2026) Antimicrobial resistance and phage sensitivity of Chryseobacterium sp. isolated from diseased rainbow trout (Oncorhynchus mykiss). Journal of Fisheries 14(1): 141207.

Van Belleghem JD, Dąbrowska K, Vaneechoutte M, Barr JJ, Bollyky PL (2019) Interactions between bacteriophage, bacteria, and the mammalian immune system. Viruses 11(1): 10.

Van Belleghem JD, Dąbrowska K, Vaneechoutte M, Barr JJ, Bollyky PL (2019) Interactions between bacteriophage, bacteria, and the mammalian immune system. Viruses 11(1): 10.

Wu Y, Ye S, Liu S, Yu J, Gao H, … Zheng J (2026) Characterization and biocontrol potential of two novel lytic phages vB_EtaS_2 and vB_EtaS_6 against Edwardsiella tarda in aquaculture. Aquaculture 612: 743245.

Yang L, Yang Q, Hu RG, Cong W, Li S, Kang Y (2024) The evaluation of bacteriophage therapy in aquaculture: a systematic review and meta-analysis. Aquaculture 588: 740925.

Zhang L, Hou X, Sun L, He T, Wei R, … Wang R (2018) Staphylococcus aureus bacteriophage suppresses LPS-induced inflammation in MAC-T bovine mammary epithelial cells. Frontiers in Microbiology 9: 1614.

Published
2026-06-02
How to Cite
Ustundag, M., & Ustundag, B. (2026). Biosafety improvement of aquaculture-associated bacteriophage preparations via endotoxin reduction: implications for Flavobacterium psychrophilum control. Journal of Fisheries, 14(3), 143201. https://doi.org/10.17017/j.fish.1258